Michael H. Woodworth

MD, MSc, FIDSA  ·  Infectious Diseases

Physician-scientist developing microbiome-based therapies to combat antimicrobial resistance and improve health. I lead clinical trials of fecal microbiota transplantation, direct a stool donor program, and integrate metagenomics with clinical research to move from pathogen-focused medicine toward ecologic health.

Positions

Emory University

Associate Professor of Medicine, Division of Infectious Diseases. Medical Director, Microbiome Enrichment Program Stool Donor Program. Sponsor-Investigator for FDA-authorized FMT clinical trials.

MaineHealth

Engaged in clinical infectious disease practice and infrastructure development of translational microbiome research in Northern New England.

Active Research
Clinical Trial

REACT

Randomized controlled trial of FMT for multidrug-resistant organism decolonization. CDC Prevention Epicenter-funded, FDA IND-authorized.

Clinical Trial

FAIR

FMT to reduce antimicrobial-resistant infections. CDC Prevention Epicenter-funded, FDA IND-authorized.

Observational Cohort

APPS

Assessing the impact of antibiotics on the gut microbiome and clinical outcomes in patients admitted to long-term care.

Analysis

Metagenomics & AMR

Strain-level (meta)genomic analyses of clinical samples to track compositional and functional dynamics and donor engraftment - within human hosts.

Epidemiology

CDC Epicenter Workgroup

Co-chair of the Prevention Epicenter Microbiome Workgroup defining research priorities for microbiome-infection interactions.

Biomarkers

Microbiome Diagnostics

Developing microbiome-derived biomarkers to improve efficiency of trials for patients who are colonized with multidrug-resistant organisms.

Reproducibility

PREMIX

Elements supporting the published results from the PREMIX phase 1 randomized controlled trial of FMT in renal transplant recipients colonized by multidrug-resistant organisms.

Selected Publications
View all publications on PubMed →
Areas of Expertise

FMT Clinical Trial Design

End-to-end experience as Sponsor-Investigator across multiple FDA IND-authorized trials of fecal microbiota transplantation.

FDA IND Regulatory Strategy

IND applications, amendments, protocol development, and ongoing FDA correspondence for investigational microbiome products.

Stool Bank & Manufacturing

Donor screening, product manufacturing, stability testing, and quality systems for investigational FMT products.

Microbiome Translational Science

Metagenomics, strain-level engraftment analysis, and biomarker development for live biotherapeutic products.